CFDE-Metabolomics Workbench Information Pages

New:

CFDE Metabolomics Workbench Virtual Summer Workshop 2024

General information:

Metabolomics Workbench

Metabolomics Workbench page on GitHub

NIH CFDE data search portal

Tools developed under the CFDE program:

MetENP: Tutorial,  on GitHub,  Appyter

Gene ID conversion:  Tutorial,  REST API (SmartAPI),  on GitHub

MetGENE:  Tutorial,  REST API (SmartAPI),  on GitHub

Clinical Observations and Vocabularies (ClOVoc)

Playbook Partnership Workflow Builder (PPWB):

We integrated MetGENE APIs into the PPWB being developed by the LINCS DCC of CFDE.

MetNet:  on GitHub,  Tutorial with example of a Playbook Workflow,  REST API (SmartAPI)

Metabolomics Workbench Knowledge Graph:  GitHub page,  Tutorial

CFDE MW Use Cases:  GitHub page,  Use Cases Document

Access and Use statistics and FAIR metrics:

on GitHub

Feb 13 - March 13, 2022,  Aug 01 - Aug 28, 2022

February 2023,  July 2023

May 2024,  April 2025